BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB018A07LP1|AL427241
(1017 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1754 1924 0.0
>3x_Contig1754
Length = 26052
Score = 1924 bits (970), Expect = 0.0
Identities = 1001/1006 (99%), Gaps = 4/1006 (0%)
Strand = Plus / Minus
Query: 1 atctgaagacgcattagagctactgaccattctaatattccaaaatcaacagagaaagtc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3701 atctgaagacgcattagagctactgaccattctaatattccaaaatcaacagagaaagtc 3642
Query: 61 aagtttaaacagaagtaattctctcctttaactcagatttccgttccatatatccaaaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3641 aagtttaaacagaagtaattctctcctttaactcagatttccgttccatatatccaaaaa 3582
Query: 121 catacacatttctttctggtcctttgcagttgagtagtttatcttttcaacctttttatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3581 catacacatttctttctggtcctttgcagttgagtagtttatcttttcaacctttttatt 3522
Query: 181 tgacacttttcttctacttgaaaggtattactggaagtaggacaataggggacaatgaga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3521 tgacacttttcttctacttgaaaggtattactggaagtaggacaataggggacaatgaga 3462
Query: 241 atttcatatcacgtgatcttctatgtttgaacaacgctatttgctatgaccccaagcagg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3461 atttcatatcacgtgatcttctatgtttgaacaacgctatttgctatgaccccaagcagg 3402
Query: 301 tcagcagatgttcagtaacatccaatagtatccttgttgattgtagataatttaatcaga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3401 tcagcagatgttcagtaacatccaatagtatccttgttgattgtagataatttaatcaga 3342
Query: 361 aagtagaaccacattacgtgatccttcttactattgttttcactttactttaaagtttca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3341 aagtagaaccacattacgtgatccttcttactattgttttcactttactttaaagtttca 3282
Query: 421 aaattaaagaacggcttttagtttagaatttcatacgtaattaggaacacaatgctaata 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3281 aaattaaagaacggcttttagtttagaatttcatacgtaattaggaacacaatgctaata 3222
Query: 481 tcttgatataaatatgtagatttactagttaaacaaactagttctttgtttcgtcaagtc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3221 tcttgatataaatatgtagatttactagttaaacaaactagttctttgtttcgtcaagtc 3162
Query: 541 tgtaaagatcaaatcgcacagtatagtcggaacacatgtaattgagtgtttcaaaaatgc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3161 tgtaaagatcaaatcgcacagtatagtcggaacacatgtaattgagtgtttcaaaaatgc 3102
Query: 601 cctttccttgcagttaaactcttttcttcctcggtaatatttcatctacacaagcattta 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3101 cctttccttgcagttaaactcttttcttcctcggtaatatttcatctacacaagcattta 3042
Query: 661 ttaatattatattcaaacataattttttgaatcatcatcaagtgctaaaaggtatccaca 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3041 ttaatattatattcaaacataattttttgaatcatcatcaagtgctaaaaggtatccaca 2982
Query: 721 gtaaaacacatagaaaccaaagccgagtgctaaaactatttttaggatttgcagtatgtc 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2981 gtaaaacacatagaaaccaaagccgagtgctaaaactatttttaggatttgcagtatgtc 2922
Query: 781 gagatttggctatactgcctctaaagcatttgagatcacttgtctcaatgaaagtggctt 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2921 gagatttggctatactgcctctaaagcatttgagatcacttgtctcaatgaaagtggctt 2862
Query: 841 gaaaagtcattacagttcattgttggaaagctgctgcaaagataaacgggtcttaaaaga 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2861 gaaaagtcattacagttcattgttggaaagctgctgcaaagataaacgggtcttaaaaga 2802
Query: 901 ttatcatgctactgcagttaaggatagcagatctgtccgtacttcactgaatgaga-tat 959
|||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||
Sbjct: 2801 ttatcatgctactgcagtaaaggatagcagatctgtccgtacttcactgaatgagattat 2742
Query: 960 tgcgttggattcaca-tcagcatc-aaatacgtgt-ctggtcgaga 1002
||||||||||||||| |||||||| |||||||||| ||||||||||
Sbjct: 2741 tgcgttggattcacattcagcatcaaaatacgtgtcctggtcgaga 2696
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8990
Number of Sequences: 1807
Number of extensions: 8990
Number of successful extensions: 54
Number of sequences better than 1.0e-20: 1
length of query: 1017
length of database: 10,358,551
effective HSP length: 16
effective length of query: 1001
effective length of database: 10,329,639
effective search space: 10339968639
effective search space used: 10339968639
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 51 (101.7 bits)